rs29570393 SNP Detail

Summary

• ID
  rs29570393
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:154301115 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAAATTTGCC TGCCTCTGCC TCCCAAGTGC TGGGATTAAA
  ATCGTGCGCC ACCACGCCCC ATGAAATCTT TATAATAACT GGTATATTTC AGTTTTCAGA
  Y
  AACTGTTTTC ATGGCCCAGA AATTGATTAA ACATTATCTG TATAAGCTGT TGGGAAGTGT
  CAAGGATTAA ACCTTGATGT TGTGTAGTTC TGTCATTTC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45339798	mCV22917605	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	C
ss148031026	ENSMUSSNP3854537	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29570393					SNP	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:154301115 () rs orientation: forward

Symbol	Name	Function Class
Cbfa2t2	CBFA2/RUNX1 translocation partner 2	Intron
Rr567835	regulatory region 567835	473 bp proximal