rs29567531 SNP Detail

Summary

• ID
  rs29567531
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:54622352 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTGCAGGC CTTGCCTACA
  CCTTGATCTT ATGGAGGCAT TTTCTTGATT GAGGTTCCCT CCTCTCCGAT AACTTTGGCC
  TGTGTCTGTC TAACCAGAAC AGTAGTCAAT GCGTGGGGGA GGGGGTAACA TAGTAGAAAG
  GAGAACCAGG TTTGATAAGA GTTGGGATTT TTATGTTTTA TCTGGAAGTT GTGGACCTGG
  R
  TGAGCCTCTG CAGTCCTACC AGGTGAATTT AACCTGTAAA GGGTCCTCTG AAGGGGAGAT
  GGTCAGGAAT GTCTGTTACC CGCTTGAGCT GGGTGTGATG AATCCAGGGG GTGATCCCAG
  CAACCTTGAT AGCAATGGGT GTGGTAAGAA CGATAGGATT CGGTCCATGA TTCCTATTGA
  GGAACAATAG GAAGGTTCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss39094148	mCV25044087	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs29567531					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:54622352 () rs orientation: forward

Symbol	Name	Function Class
Rr403785	regulatory region 403785	1342 bp upstream
Rr480227	regulatory region 480227	1031 bp proximal
Rr480228	regulatory region 480228	1129 bp proximal
Rr480229	regulatory region 480229	1749 bp proximal