rs29556508 SNP Detail

Summary

• ID
  rs29556508
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:151866676 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGATGAGAGC TTTGGACTTG
  TCTGGATGGC CATTATTCAG CCTCCTGCAG TGGCCACGGG GCACTTTTCT GATTGATGGG
  CATGCTCTAT GTAGAGACTG TGGCTAGTCT GCACCATTGT CATGTTGTGG CCCTGTACCC
  AGGGTGCTCA CTGTGCTGGC CCTGCTTACA GTATAACCAT CAAGTTCTTG GTGGGTCATG
  R
  CTTCCTCTGC TAGTGTCCGA GAGAAAGTCT GACGATTGCA ACTGGATATG CCTACAGCAG
  CAACATGCCA CCATTCTGTG GCTAGCCCTC CTGAGCTCTG CCGGAGTTCC CAGAGGCTGG
  AAACACTGTC CACCTTGGAA CCAGGAGGGC GATCATCTGG GATGCCCTGG CCTGATGGGG
  GAGGGGAAAG CATGGTGCTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45336519	mCV23078887	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss147960963	ENSMUSSNP1367331	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
ss320561853	CHEV_2_151850492	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29556508					SNP	A	G	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:151866676 () rs orientation: forward

Symbol	Name	Function Class
Gm75398	predicted gene, 75398	448 bp upstream
Gm75402	predicted gene, 75402	within coordinates
Rr374074	regulatory region 374074	within coordinates
Rr567263	regulatory region 567263	331 bp distal
Rr567264	regulatory region 567264	within coordinates