rs29555810 SNP Detail

Summary

• ID
  rs29555810
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:153388126 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATATTGGTGG CTAGTCCTTT
  CTGAGAGCAC AGTGCCTTCT GCCCTGTGTT TGGCCCATTA TGAAACCTGT GGCCTGCTAG
  CAAGTGCCTA GGGCCAAGGC CATTTGTCAA GTGCTGATTT GTCTCTCAGA GTAGTGTCAC
  CACCATCCCT CATATCACCC ACGGGCCAGC TCTGGTTCCC TGAAGCATCT CTCGGTCTCC
  Y
  GCCTTCCACT TGGCCTTGCC CTCTGTACTC TATGGCGCTG GTGTCTTCAG GACGATGTTC
  CCAGTCAGAG TAGCACGGAA CCCTTTCCTT CTGGCTGTTT CTGTACCCCC ATGAGGAGGA
  GCCGTCTCTC TAACAGGTGC TACTTGCCTA GGCTCAGCCT CAGCCTACCA TCACTGTGGT
  GTGTGTGGGT CCAGCCCAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45334151	mCV25321334	ABI	CRAMUS_MOUSE	f	SNP		T	C	T
ss147996123	ENSMUSSNP5908843	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29555810					SNP	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153388126 () rs orientation: forward

Symbol	Name	Function Class
Gm75205	predicted gene, 75205	1030 bp upstream
Gm75218	predicted gene, 75218	1544 bp downstream
Rr567675	regulatory region 567675	1925 bp distal
Rr567676	regulatory region 567676	1086 bp distal
Rr567677	regulatory region 567677	540 bp proximal
Rr567678	regulatory region 567678	1041 bp proximal
Rr567679	regulatory region 567679	1953 bp proximal