rs29554612 SNP Detail

Summary

• ID
  rs29554612
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:102635025 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACAACCGTTA TCTGAGTGCT CCTGGATAAC TGTTTTGATC
  CCTTTCTTCT TTTCACCCTT CTCCTTTTAT CTTTCTGACA TCTTTTTCTG GATATTCTCT
  M
  TTTCTTGAGG AGACTTCAAG TGATAGGAGG GAGAAAGTAA AAAAGCAAAG CTCTCAAGAA
  CTCCACTGAC TTCATCAGAA ATCTGAATTT CCTTCAGGT                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45334923	mCV25049800	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29554612					SNP	A	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:102635025 () rs orientation: forward

Symbol	Name	Function Class
Rr561739	regulatory region 561739	704 bp distal
Rr561740	regulatory region 561740	611 bp distal
Rr561741	regulatory region 561741	173 bp distal
Rr561742	regulatory region 561742	420 bp distal
Rr561743	regulatory region 561743	714 bp proximal