rs29549607 SNP Detail

Summary

• ID
  rs29549607
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:131095390 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TATGTTTTTA CCCTGTCTTT TAAACATTTT GCTTATGGAA
  TTTCTCCCTA CACCCAAACA AACTGTTCCT CCAAGCTTCC CCAATGCCTC TCCCCCGCCC
  R
  CCCACAGCTC CCTTTGCTCC AGTTGTTCTG ACACATCTGC AATGCTGTGG AGCGGAGGGC
  TCTGCCTACA AGGGACCTTC ATCCCTTTCA TCCTAGGCC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45333970	mCV25352513	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss147601916	ENSMUSSNP6772873	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs29549607					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:131095390 () rs orientation: forward

Symbol	Name	Function Class
Gm75131	predicted gene, 75131	745 bp downstream
Rr397320	regulatory region 397320	477 bp upstream
Rr565224	regulatory region 565224	17 bp proximal
Rr565225	regulatory region 565225	696 bp proximal