rs29536477 SNP Detail

Summary

• ID
  rs29536477
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:179837621 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATAC AGGCCGGGTC CACTACCCGC
  R
  TGGCTTGGGT GGTATGGGGT AGGAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45331090	mCV23773505	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A
ss148389922	ENSMUSSNP2283579	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss320631816	CHEV_2_179930533	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29536477					SNP	G	G	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:179837621 () rs orientation: forward

Symbol	Name	Function Class
Lama5	laminin, alpha 5	Intron
Rr572663	regulatory region 572663	844 bp proximal