rs29526211 SNP Detail

Summary

• ID
  rs29526211
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:76037451 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTCATAGA GACAGCCTGG
  AGCTGGAAGG AAGGAGCATC CCTAACTCAA AGTCCTTTAG CCAGCGTCCA GGGTGCAGAG
  ACTGGCATCT GGTGCACTTG GCTTTAGGCA GCCTAGACTC ATTCAGGGTG ATGGCTCTGC
  TTTGAAGAAC CTGTGCTCAG GAAACCTGAC TGTGGTTGCT TCTGCTACCT GCCAGCCTTT
  R
  GCTACTTTGG CCCTGCAGAG ATATCAAAAG CATCAGAGGT GAAAGCCAGC AGGAGGGATA
  AGCAAATCAC TGATAATCTG TAGTGGGAGC TTGGAAAACA TGAGCCCTAC AGACGTCACT
  TGACAGATAA TTAGGCAGAA AAATGAACCC AGGAGGGCCT TGGACTGCTT TGGGCATGAA
  AAGAATGTCT CTCTTCAGTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45826116	mCV22889957	ABI	CRAMUS_MOUSE	f	SNP		A						G		G
ss51745859	NES14733937	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	G	G	G		G	G	G	G		G	G	G	G		A
ss148693372	ENSMUSSNP7116534	ENSEMBL	ENSEMBL_Sanger	f	SNP		A								G
ss321571975	CHEV_5_76272816	CHEVERUD	SCREENING_POP	f	SNP													G					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs29526211					SNP	A	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51745859	NES14733937	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:76037451 () rs orientation: forward

Symbol	Name	Function Class
Gm73081	predicted gene, 73081	within coordinates
Rr613502	regulatory region 613502	407 bp proximal
Rr613503	regulatory region 613503	1589 bp proximal