rs29524668 SNP Detail

Summary

• ID
  rs29524668
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:126339541 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCATTTTTAG TATATTTTTT TAATTTTGTG TGTGAGTATT
  TCCATGCATG TATGCATGTG CACCCGTTCC TGCCTGATAT CTATGGAGGC CAGAAAAGGG
  R
  ATGAGAGTCC CTGGAACTGG AATGTCAGAT GGTTGTAAAC TGTCCTGTGG GTGCTGGAAA
  CTGAACCTGC GTCTTCACCT GTCCAGCCCA TGCCCAAGT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45326474	mCV22622681	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss147505007	ENSMUSSNP3057731	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs29524668					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:126339541 () rs orientation: forward

Symbol	Name	Function Class
Atp8b4	ATPase, class I, type 8B, member 4	Intron
Rr564345	regulatory region 564345	1097 bp distal
Rr564346	regulatory region 564346	1250 bp proximal
Rr564347	regulatory region 564347	1822 bp proximal
Tssr19934	transcription start site region 19934	1444 bp upstream
Tssr26038	transcription start site region 26038	540 bp downstream