rs29515717 SNP Detail

Summary

• ID
  rs29515717
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:105143415 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTGG CCAAAATGGT GAGCTTCAGG
  W
  TCTATGAAAA GCCCGTGTGT CAAAA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J
ss45324790	mCV25064968	ABI	CRAMUS_MOUSE	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J
rs29515717					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:105143415 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr562208	regulatory region 562208			1365 bp distal
Rr562209	regulatory region 562209			1446 bp distal
Rr562210	regulatory region 562210			705 bp distal
Rr562211	regulatory region 562211			98 bp proximal
Them7	thioesterase superfamily member 7			Intron
				Noncoding-Transcript-Variant