rs29482881 SNP Detail

Summary

• ID
  rs29482881
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:45050791 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACCTTAGTT GCCTGTAGTT
  CTTTATGAGT CAGGGGTTGA GACTTTCTAG GCAGCCCCCA TCAACATTAC TATGACTATT
  AATTTTTCTT TGTTAATCTC ATGTTTAGAT TATCATGGTG TGGAAGCATA CATAAAATTA
  GTAAAGTAGA AACTGAGCAG GTTGTACTTA TGTGTCTAGA AATGCATAAC TGTATATGTA
  Y
  GTCTATTTAT ATATGCATAT ATCTATAATA TATACATTTA TACATATATT TATACATATA
  TTTATACATA TATACACATA TAATACATAT GTGTACATGT ACATATATAA ATGCATATAT
  GTATAAATAT ATATGTATAT ATAATATACA TATACATTTA ATCATATATA TATATATATC
  ATATATATAT ATATATATAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J
ss38858294	mCV24282501	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss132087994	ENSMUSSNP6463170	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J
rs29482881					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:45050791 () rs orientation: forward

Symbol	Name	Function Class
Gm12160	predicted gene 12160	979 bp upstream
Rr445733	regulatory region 445733	889 bp proximal
Rr445734	regulatory region 445734	990 bp proximal