rs29459559 SNP Detail

Summary

• ID
  rs29459559
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:62737856 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAAT ATACAGCAAC TGTCTCTACT
  W
  TTGTGGTGCC AGGGTTAGGA GATTT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38828913	mCV23975304	ABI	CRAMUS_MOUSE	f	SNP	A	A	T	T	A
ss132288603	ENSMUSSNP6201156	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	T		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29459559					SNP	A	A	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:62737856 () rs orientation: forward

Symbol	Name	Function Class
Fbxw10	F-box and WD-40 domain protein 10	39 bp upstream
Rr386163	regulatory region 386163	within coordinates
Rr448938	regulatory region 448938	within coordinates
Tssr102067	transcription start site region 102067	32 bp upstream
Tssr102068	transcription start site region 102068	60 bp upstream
Tssr102069	transcription start site region 102069	81 bp upstream