rs29456270 SNP Detail

Summary

• ID
  rs29456270
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr11:102757409 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTTCTACC TTGTACATCA
  GCAAGCAAGG TAATGTGCCT TAATCAGTAT TGAAGGGCAA TTAGTTAAAA AAAAAGAAAA
  ATGAGAAGAG CAAGCAATGA TGTAAGCTCA GAGGCCACAG ACCCCAGGTT CTCACCTCCT
  TCATTGGAAA CAAAGCAGGT GAGTGTCATA AAAATAAAAA GAAACAATCT GGGTTTAGGG
  Y
  TTTTTGTTTG TTTCTTTGTT TGTTTGTTTT ATGCATATGA GTACACTGTA GCTGTCTTCA
  GACACACCAG AAGAGGGCAT CAGATTCCAT TACAGATGGT TGTGAGCCAC CATGTGGTTG
  CTGAGAATTG AACTCAGCAC CTCTAGAAGA GCAGTCAGTG CTCTCAACCT CTGAGCCATC
  TCTCCAGCCC TTGGTTTTGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38824031	mCV24351072	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	C
ss323834866	CHEV_11_102727897	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29456270					SNP	C	T	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:102757409 () rs orientation: forward

Symbol	Name	Function Class
Eftud2	elongation factor Tu GTP binding domain containing 2	Intron
Gm74253	predicted gene, 74253	within coordinates
Rr457439	regulatory region 457439	1889 bp distal