rs29413905 SNP Detail

Summary

• ID
  rs29413905
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr11:102755636 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCTCAGCAGC ATCAATGAAA AGGACCACTC CATCTGAGAT
  GCGCAAGCCA GCTGTGACCT CATCAGAAAA ATTCACATGA CCTGAAAAGC AAATATCCAG
  Y
  TATCGTTTGG TGGAAGGAGG CAGTTAGCTT CTAGGGTGAC CCAAGGAACC AGTCCTATGA
  ACTCCAAATA TCCTTCTTCC TGCCCACAGC ACCTCACAG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38735578	mCV24351071	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	T
ss132739426	ENSMUSSNP5828216	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29413905					SNP	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:102755636 () rs orientation: forward

Symbol	Name	Function Class
Eftud2	elongation factor Tu GTP binding domain containing 2	Intron
Gm74253	predicted gene, 74253	713 bp upstream
Rr457439	regulatory region 457439	116 bp distal
Rr457440	regulatory region 457440	317 bp distal