rs29405080 SNP Detail

Summary

• ID
  rs29405080
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr11:93440151 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGAG TGCTCATTCC ACCCTCGCAG
  Y
  ATTCGTGGCC CACAGGAATT ATCAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38711963	mCV24722525	ABI	CRAMUS_MOUSE	f	SNP		T	C
ss38860497	mCV24722518	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss132619830	ENSMUSSNP1195272	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		C
ss323807245	CHEV_11_93410639	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29405080					SNP	C	T	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:93440151 () rs orientation: forward

Symbol	Name	Function Class
Car10	carbonic anhydrase 10	Intron
Rr454595	regulatory region 454595	1675 bp proximal
Rr454596	regulatory region 454596	1768 bp proximal