rs29342164 SNP Detail

Summary

• ID
  rs29342164
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:13082417 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATGT GAACCTGCGG AGTTTCTAAA
  Y
  CTGAGTCACA AAACCAAGAG TTGTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss38574487	mCV23340989	ABI	CRAMUS_MOUSE	f	SNP	C	T
ss146812798	ENSMUSSNP5258353	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss323254434	CHEV_10_12926479	CHEVERUD	SCREENING_POP	f	SNP			C	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs29342164					SNP	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:13082417 () rs orientation: forward

Symbol	Name	Function Class
Gm47402	predicted gene, 47402	1028 bp downstream
Phactr2	phosphatase and actin regulator 2	1044 bp downstream