rs29330234 SNP Detail

Summary

• ID
  rs29330234
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:13079035 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCTTGTACA TCTATCAGTT TTGAAGTCCC AGCAGAAGGC
  AAACAAACAG ATTGGATTAT AGAGCCAAAA CGAAATGCTT CACTTCTCTG TGTCCTCAGC
  M
  TCTTTGAGCC CTCTCTGTAC CCAACTCTAT TCTTATATCA GCCTGATCTC TGCTGTTCTG
  TCCTTCAGCA AGTGGCATTG ACATTCTTTA TACCGCACA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38551730	mCV23341037	ABI	CRAMUS_MOUSE	f	SNP		C					C		A
ss47816559	NES11975812	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C		C	A	C	C	A	C	C	A	C
ss146812702	ENSMUSSNP978705	ENSEMBL	ENSEMBL_Sanger	f	SNP		C							A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29330234					SNP	C	C	C	C	C	C	C	C	A	C	C	A	C	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47816559	NES11975812	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:13079035 () rs orientation: forward

Symbol	Name	Function Class
Gm47402	predicted gene, 47402	1935 bp upstream
Rr427749	regulatory region 427749	1010 bp distal