rs29330231 SNP Detail

Summary

• ID
  rs29330231
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:13082121 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTTT TTCTTGATTC AATCACTCAA
  K
  GTTGGAAGAT CTACTGTAAA TCTAG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss38554971	mCV23341001	ABI	CRAMUS_MOUSE	f	SNP	T	G
ss146812782	ENSMUSSNP297562	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss323254430	CHEV_10_12926183	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs29330231					SNP	T	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:13082121 () rs orientation: forward

Symbol	Name	Function Class
Gm47402	predicted gene, 47402	732 bp downstream
Phactr2	phosphatase and actin regulator 2	1340 bp downstream