rs29251907 SNP Detail

Summary

• ID
  rs29251907
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:54624171 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTAGCAGTT GAAAATATAG
  ACAGGGCTGG TGAGATGGCT CAGGGGTTAA GAGCACCGAC TGCTCTTCCA AAGGTCCTGA
  GTTCAAATCC CAGCAACCAC ATGGTGGCTC ACAACCATCT GTAATGAGAT CTGACGCCCT
  CTTCTGGTGT GTCTAAGACA GCTACAGTAT ACTTACATAT GATAAATAAA TAAATATTTT
  W
  TAAAAAAAGA AAATATAGAC AGGCCTTCAC ACAATGTGAA GAACATTTGG ATGTTATGAG
  CCACTTCAAG GCAGTGGGGT GGGGGTGGGG AAGGGGGACG GTCATCAGTG TCATCATCTG
  GAGGACTTTC ACCTTGGGCA GTGCAACCTG CTAGTTTAGA CATTTTTCCA GTGACTTTTT
  TACAATGTGC ACACTGATTT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss39066105	mCV25044272	ABI	CRAMUS_MOUSE	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs29251907					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:54624171 () rs orientation: forward

Symbol	Name	Function Class
D13Mit54	DNA segment, Chr 13, Massachusetts Institute of Technology 54	1826 bp proximal
Rr403785	regulatory region 403785	177 bp downstream
Rr480227	regulatory region 480227	767 bp distal
Rr480228	regulatory region 480228	237 bp distal
Rr480229	regulatory region 480229	49 bp distal