rs29243293 SNP Detail

Summary

• ID
  rs29243293
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:92269472 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACTCACAA AAAGGATCAG
  TAGCAGCAAA TGGAGTCACA AGGTGACTTT GCATAAACCA CAATGTTGGC TTTTCAGCTT
  CTACCGGCAC TGTAGAGATC AAAACTAGCT GTGGCTGTTG ATAGGAGAAG TCGAGTGTTC
  CCTGAAAGCC AGCAAATGTC AATTACTTTT GGACACCTGT TATGTGATTA TGATTTTTTT
  W
  AAAAGCCAAA TGTTCAGTAT GCCATTTTAA ATAAGGAGAG AGGGGATAAC CTTATCAGGG
  AAAGTGCTGT CAGGGCAGAC ACTGTCCTCA GAGGCCAAAC TGTCACACAC AGGCTGAGCA
  GAGTTCCTTG TTGAAACTGG GATTCATTTG GTTAACAAAT CTTACAGCTA CTGCTGGAAA
  ACCAAGACAC TCTGCTCAAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39061929	mCV24963385	ABI	CRAMUS_MOUSE	f	SNP	T	A	T	T
ss144931609	ENSMUSSNP6969556	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A		T
ss324479875	CHEV_13_92902919	CHEVERUD	SCREENING_POP	f	SNP					A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29243293					SNP	T	A	T	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:92269472 () rs orientation: forward

Symbol	Name	Function Class
Rasgrf2	RAS protein-specific guanine nucleotide-releasing factor 2	1308 bp upstream
Rr483653	regulatory region 483653	818 bp distal
Tssr4138	transcription start site region 4138	1403 bp upstream
Tssr123423	transcription start site region 123423	1284 bp upstream
Tssr123424	transcription start site region 123424	1155 bp upstream
Tssr123425	transcription start site region 123425	1127 bp upstream
Tssr123426	transcription start site region 123426	1098 bp upstream
Tssr123427	transcription start site region 123427	1078 bp upstream