rs29199964 SNP Detail

Summary

• ID
  rs29199964
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:31611151 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TTATTTTTCC CCTTCTACCG AAGAATGAAT GAGTCACCAG CTTTCAACAG ATTTTCAAAG
  GATTACTTGA CCCAAAGAGG TCGAGAGCCA GCCAGGCATG ATGGCACATC TCAAGAGACT
  TGGGGAACTG GGATGGGAGA ATCACTTGAG TGGAGAGAGA GAAACAGAAA CAGAGATAGA
  CATAGAGAGA CACAGAGAGA CAGAAACGGA GAGACAGAGA GAGAGACACA GAGAGAGAGA
  AACAGAAACA GAGATAGACA TAGAGAGACA CAGAGAGACA GAAACGGAGA GACACAGAGA
  R
  AGAGAGACAC ACAGAGAGAG AGACAGACAG AGAGAGAGAG AGTTTTTAAC ACAGTTAAAG
  ATGAAGGAGA CCTTGTCCCA CTGCTTTGCT GCCTCTTCAG TTAAGATGGA ACTATACAGT
  CACTCACCTG ACTTCCCACC AGTATGGACT TTAAGCCTCT GGAACCAAAA GCCAAAAAAG
  TGAACTGTTT CTTTTCTAAA CTGATTTTCG TCAAAGAAAT AGAGAAGTAA CTAAACACAC
  TGTAAGAACT TTGTTGTTAT AATGGTGCAT ACGTGCCAGG CGGTGGTGGT GCATGCCTTT
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss39016173	mCV24464349	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs29199964					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:31611151 () rs orientation: forward

Symbol	Name	Function Class
Gm48524	predicted gene, 48524	1714 bp upstream
Rr464651	regulatory region 464651	888 bp distal
Slc26a4	solute carrier family 26, member 4	1183 bp upstream
Tssr116044	transcription start site region 116044	1168 bp upstream