rs29194271 SNP Detail

Summary

• ID
  rs29194271
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:31613836 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTTCTTTC TTTCTTTCTT
  CCTTCCTTCC TTCCTTCCTT CCTTCCTTCC TTCCTTTCTT CTTTCTTTCT TTCTCTCTTT
  CTTTTTGTCT AAAGAGACAC ACTATAGTGT GGATTATTTT ATTTTATGCT TAAAATTAAA
  TATTTATTTA GAAGAATTTT TAAAAACAAA AAATGCTAAT AATTGCAAGA GTTCTGATTA
  Y
  TTGTACCTCC CCCTAAGACA GGGTGTCTCT GTGTAGCCCA GGCTGTCCTG GAACTTGTTC
  TGTAGACTGG GATGGCCTCA AACTCAGAGA TCTACTTGTC TCTGCCTCCT GAGTGCTAGA
  AGTTAAGGTG TCTCCCACCA TGCCTGACTA AGAATGTTGT ATTTAAAAGA CATCTTGATT
  CTGATTCTTC CTGGCTTTGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39010127	mCV24464019	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C
ss137568633	ENSMUSSNP4308896	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29194271					SNP	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:31613836 () rs orientation: forward

Symbol	Name	Function Class
Gm48524	predicted gene, 48524	612 bp downstream