rs29180014 SNP Detail

Summary

• ID
  rs29180014
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:31613652 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AGGAGCTTGT TCAGTTCCTA GTTCCTACGT GGTGGCTCAC AACCATCCAT AACTCCATTG
  CCAGCAGACC CAACACCCCC TTCTGACTTG TGTGGGCATG GTGCAAATGT GATGCCCAGG
  CAAACACTCA CAAACAAAAT GAAATAAATA AATCTTTTAA AAAATGATTC TAGTCCCATG
  ATAAGAGCAG TCAATCCATC TGGCTGCATC CATGTTTCTT TCTTTCTTTC TTTCTTTCTT
  TCTTTCTTTC TTTCTTTCTT TCTTTCTTTC TTTCTTTCTT TCTTTCCTTC TTTCTTTCTT
  Y
  CTTCCTTCCT TCCTTCCTTC CTTCCTTCCT TCCTTCCTTT CTTCTTTCTT TCTTTCTCTC
  TTTCTTTTTG TCTAAAGAGA CACACTATAG TGTGGATTAT TTTATTTTAT GCTTAAAATT
  AAATATTTAT TTAGAAGAAT TTTTAAAAAC AAAAAATGCT AATAATTGCA AGAGTTCTGA
  TTACTTGTAC CTCCCCCTAA GACAGGGTGT CTCTGTGTAG CCCAGGCTGT CCTGGAACTT
  GTTCTGTAGA CTGGGATGGC CTCAAACTCA GAGATCTACT TGTCTCTGCC TCCTGAGTGC
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss38998531	mCV24464027	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs29180014					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:31613652 () rs orientation: forward

Symbol	Name	Function Class
Gm48524	predicted gene, 48524	428 bp downstream