rs29177852 SNP Detail

Summary

• ID
  rs29177852
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:31612648 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTTGCTAC TGTGTGTGAT
  ACTTCACAGT CACCGCTGAT TTAAGGGCCA GGCGAGGCAG AACACTGCTG TCATCCCAAA
  GGCAGAGGCG GGAACAGAGT CAGAATTTCA AAGCCAGCCT GGCCTACATA AAAAGTTCCA
  AGCCAACCAG GCCTGTATAA TGAGATCCTG AATCCAGTCT CAAAAACAAG CAAGCAATCC
  W
  AAAAACAAAA CAACAAACCA CTGTCACTCA GACTTACAGT GTGCGAGACC ATCCCGCGGT
  CAGGTCTATA TATCATTCAT TCAAGAGTTT ATTAAGAATT CATTTGTGCT CCCTTATCAC
  ACCAAGGACT AGGACCATGG CTGTCCACAG CCTGAGATCT GCAAACTGTG TGCCCACAAT
  TGCCCACTTG GACTTTTGCG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	MSM/Ms
ss38981297	mCV24464315	ABI	CRAMUS_MOUSE	f	SNP	T	T	A	A
ss137568597	ENSMUSSNP3543224	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	A		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	MSM/Ms
rs29177852					SNP	T	T	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:31612648 () rs orientation: forward

Symbol	Name	Function Class
Gm48524	predicted gene, 48524	217 bp upstream