rs29159773 SNP Detail

Summary

• ID
  rs29159773
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:31613406 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATGATTGTT TGGTAATTAA
  TGGCATTCTA TAATTAATGA AGAATGATAA TTTTATAAAT TCATAATTAT ATCCGTGCTT
  TTAAATGACT GATAGAAAAA AAAATAACCT GAAGGTTGCT GAAGTGATGG CTCAGTGGTT
  AGGAGCTTGT TCAGTTCCTA GTTCCTACGT GGTGGCTCAC AACCATCCAT AACTCCGTTG
  M
  CAGCAGACCC AACACCCCCT TCTGACTTGT GTGGGCATGG TGCAAATGTG ATGCCCACAT
  TCATGCAGGC AAAACACTCA CAAACAAAAT GAAATAAATA AATCTTTTAA AAAATGATTC
  TAGTCCCATG ATAAGAGCAG TCAATCCATC TGGCTGCATC CATCTTTCTT TCTTTCTTCC
  TTTCTTCTTT CTTTCTTTCT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss38951368	mCV24464036	ABI	CRAMUS_MOUSE	f	SNP	C	A
ss137568621	ENSMUSSNP6796745	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs29159773					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:31613406 () rs orientation: forward

Symbol	Name	Function Class
Gm48524	predicted gene, 48524	182 bp downstream