rs29151468 SNP Detail

Summary

• ID
  rs29151468
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:31613104 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACCCAGAAT ATGCAAGATA
  TTGGTGGCAT TACCATCCTG CACTGGTTTG GATGTGAAGC CATCAGAGGC CTTTCTGTAG
  AAAGTCCAGG GATTCTTATT TCACTTTCCC ATGACTCTCC CCTCATCCAG CTCTTGGCTG
  GAGCTCTTGT GTTTATGAGG TTGAGTGTTC TTCAACCTTC CAAGCTCAGC ACTTGGCCTG
  W
  CAGGAATCTC CCTGGGCAGC CTAGGCATGA CAGCAGAACC CAGGTATCCA CAAGAGATGA
  TAAAGAGACA CGAGAGGAAG AGCTGAAATC AGATTCACAA AAATGATTGT TTGGTAATTA
  ATGGCATTCT ATAATTAATG AAGAATGATA ATTTTATAAA TTCATAATTA TATCCGTGCT
  TTTAAATGAC TGATAGAAAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38929302	mCV24464037	ABI	CRAMUS_MOUSE	f	SNP		T	T					A
ss50966257	NES14423317	PERLEGEN	MM_PANEL2	f	SNP	T		T	T	T	T	T		A	A	A	A	A	A	A	T	T
ss137568615	ENSMUSSNP6515772	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29151468					SNP	T	T	T	T	T	T	T	A	A	A	A	A	A	A	A	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50966257	NES14423317	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:31613104 () rs orientation: forward

Symbol	Name	Function Class
Gm48524	predicted gene, 48524	within coordinates