rs29135358 SNP Detail

Summary

• ID
  rs29135358
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:31613585 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ATATCCGTGC TTTTAAATGA CTGATAGAAA AAAAAATAAC CTGAAGGTTG CTGAAGTGAT
  GGCTCAGTGG TTAGGAGCTT GTTCAGTTCC TAGTTCCTAC GTGGTGGCTC ACAACCATCC
  ATAACTCCAT TGCCAGCAGA CCCAACACCC CCTTCTGACT TGTGTGGGCA TGGTGCAAAT
  GTGATGCCCA GGCAAACACT CACAAACAAA ATGAAATAAA TAAATCTTTT AAAAAATGAT
  TCTAGTCCCA TGATAAGAGC AGTCAATCCA TCTGGCTGCA TCCATGTTTC TTTCTTTCTT
  Y
  CTTTCTTTCT TTCTTTCTTT CTTTCTTTCT TTCTTTCTTT CTTTCTTTCT TTCTTTCCTT
  CTTTCTTTCT TCCTTCCTTC CTTCCTTCCT TCCTTCCTTC CTTCCTTCCT TTCTTCTTTC
  TTTCTTTCTC TCTTTCTTTT TGTCTAAAGA GACACACTAT AGTGTGGATT ATTTTATTTT
  ATGCTTAAAA TTAAATATTT ATTTAGAAGA ATTTTTAAAA ACAAAAAATG CTAATAATTG
  CAAGAGTTCT GATTACTTGT ACCTCCCCCT AAGACAGGGT GTCTCTGTGT AGCCCAGGCT
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss38900876	mCV24464028	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss137568627	ENSMUSSNP1853242	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs29135358					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:31613585 () rs orientation: forward

Symbol	Name	Function Class
Gm48524	predicted gene, 48524	361 bp downstream