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rs28334770 SNP Detail
Summary
  • ID
    rs28334770
  • Variation Type
    SNP
  • Alleles
    A/C
Genome Location and Flanking Sequence
  • Location
    Chr4:134794216 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                ACTCTGCAAA TTTTGTAAGT
    TCTGCTCTTC ATCAGAGGAT GCTATTCCTA GAAGAAAATG GGTCTCGTCT CTGTGAAAGT
    AGAGCCCCTC CCCCTTCCAG GAGTCTTCCA GGAGTGAGAC CATATTCGCC AGAGCTGCAG
    TGGTGACTTC AGGAAGAACT CAGCTAGCAA GGTCATGCAG AGACTATCAG AGCCTACGAA
    M
    ACTGACCGTC ATCGCCACTA GGGGGCGGCC GGGCTATGTG CAGGTGTGAG GTGTTGCCCA
    GGGCTAGTCA CTTTTACCAT AGGCTAGTCC TGTTCCTGGT CTTATCCTGC AGACGCGAGG
    AGGCCTGGTC TATCTCCTTG CCTTCCATTT GGGTAAGGGA AAAACGAATC AGAAGACTGA
    AACTGTTAAC TTGTCTCTGC                                            
    
    M = A/C
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
ss37763593 NES09157816 PERLEGEN MM_PANEL2 f SNP A A A A A C A A C C A A C A
SNP Consensus Information
SNP Consensus Type
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
rs28334770 SNP A A A A A C A A C C A A C A
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss37763593 NES09157816 PERLEGEN MM_PANEL f SNP A/C
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr4:134794216 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Rr601914 regulatory region 601914 within coordinates
Rr601915 regulatory region 601915 11 bp proximal
Rr601916 regulatory region 601916 406 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory