rs28326211 SNP Detail

Summary

• ID
  rs28326211
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:101139176 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTCTTCTG TTACTCTTTC
  TCTGTCTGCA TGTGTGTTTT ACCTCCAGAG TTTTTCAACT GCTATATGGC CAACTTCTCA
  TCTCTCCCCA CCCCCCTCAC CCCCAACTCT TACTGTGCCT CTCTATGAGT AATGGACTTT
  AGTGACTTTT GTGTAGGAAT TGCCTAGCTT CACCATACTT AAACTTCCAT AAAAATTTCA
  Y
  GCAATGGGTA TTTGTTTGAA TTAAAATACA TGACAATATC TCTAACAGTG TACTGAGTCT
  TTAGCGAACT CACTTAAGCT GGAAATGTCC ATTCACATTG TACCAGGAGA GAGCAAGAAA
  GGATAAACAT GTATTTAAGT TGTTCCAGGT ACCTATCATC TGCTTTAATT CCCATCATTA
  TCTTTTGAGG AGAGATTAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	NZW/LacJ	PWD/PhJ
ss38313039	NES09547093	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	NZW/LacJ	PWD/PhJ
rs28326211					SNP	T	T	T	T	T	T	T	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38313039	NES09547093	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:101139176 () rs orientation: forward

Symbol	Name	Function Class
Gm69021	predicted gene, 69021	within coordinates
Rr376921	regulatory region 376921	1046 bp upstream
Rr596107	regulatory region 596107	1969 bp proximal