TTGGTTTGCG TATGTCATAT TTGGATTCTT CAAGCACATT TATTTGTTAA TTTGTCGTAT GTGTGATGTG TATGTGATGT GTGTGTGGTG TGATGTGTAT S ATACGTGTAT GTGTGTGTAT GTGTGGTGTA TGGGTAGGGA GGTGCAGGCC AGAGGACCAT GAAGGAGTCA GTTCTCTCTA TTATGTGAGT CCTGACACAG S = C/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
DBA/2J |
FVB/NJ |
KK/HlJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss38312441 | NES09534178 | PERLEGEN | MM_PANEL2 | f | SNP | C | G | C | C | C | G | C | G | C |
SNP Consensus Information | ||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
DBA/2J |
FVB/NJ |
KK/HlJ |
WSB/EiJ |
||||
rs28307018 | SNP | C | G | C | C | C | G | C | G | C |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss38312441 | NES09534178 | PERLEGEN | MM_PANEL | f | SNP | C/G |
Location: Chr4:101349626 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
D4Mit176 | DNA segment, Chr 4, Massachusetts Institute of Technology 176 | 289 bp distal | ||||||
D4Mit176.3 | DNA segment, Chr 4, Massachusetts Institute of Technology 176.3 | 120 bp distal | ||||||
Rr596165 | regulatory region 596165 | 1338 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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