rs28302432 SNP Detail

Summary

• ID
  rs28302432
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:80088754 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACTTTAGTT AAGTGAGTGA
  TCTTTCTGCA CTGACTATGG GTTTCTTTGA TGGAGAGTTC TGAACCTTTG ATGCTTTTGA
  AAGGTTTTCA CAAATCAAAC TCTAGACTAG ATCTTCTGCC TTTGGACTTA CTTTTGGTGC
  ATCCAGAAGA CTTTTAGAAA CAATCTAACA AGACAAACCA GTTAAGCTAA TGTACTGTTT
  R
  CACAGAATGT TTTTGCAAAC AGAAAAGGAA TAAAAGATCT TTGTAACTAC AGCTCTCTCC
  CTCCTACGTA TTCTTCTGAG ACATGCAAAT GCGAATATGT CAGCTTCCTC TAAGACAAAG
  TGCTTGATCA CAGATCTGTA ATACCCTGAT AGAAAGAAAA ATTTAAAAAA TTCAGAAGAA
  GGCATATTTA AACCCTGCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38182654	NES09237907	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs28302432					SNP	A	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38182654	NES09237907	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:80088754 () rs orientation: forward

Symbol	Name	Function Class
Tssr24926	transcription start site region 24926	613 bp upstream