CAAGAACCTG AGCGGAGCAG AGGAGGCAGG GCAGGGCATC CCATGCCCCA GGACTTTAAA GTAATCATCA GTTAAAAAGT TCCTCTTACT GGGGACCAAG GTTAGTAACG CTAAGGTCAG GTAACTCTCC TCCTTCCAGG TTTAGGTGGA AGAGGAAGTG ATAGGGCCAG GGTACAGGAG CCTTGGTTAC TCTTTCAAGT K CCAGCTTTGT GGGAACAAAA CACAAGACCT AAATTCTTGT CCAACAAGCC CTGATGAAGG GGAGTGTTTT GGCTACGTGG CAGCAGAGGG CGCCAACTCT GGAGAACTCC CTAGAGTGGT CCCCCCCCCC CCCCCCCCCC GATAAAGGGT GGCAGGGAAT TCCAAGGCTA GATCTATCTA GCTCTCAGCA CTTGCCTCTA K = G/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | C3H/HeJ |
CAST/EiJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|
ss38055507 | NES09413490 | PERLEGEN | MM_PANEL2 | f | SNP | T | T | T | T | T | G | T |
SNP Consensus Information | ||||||||||||
SNP | Consensus Type | C3H/HeJ |
CAST/EiJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs28295685 | SNP | T | T | T | T | T | G | T |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss38055507 | NES09413490 | PERLEGEN | MM_PANEL | f | SNP | G/T |
Location: Chr4:62739906 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Rr593424 | regulatory region 593424 | 76 bp proximal | ||||||
Rr593425 | regulatory region 593425 | 1003 bp proximal | ||||||
Rr593426 | regulatory region 593426 | 1096 bp proximal | ||||||
Rr593427 | regulatory region 593427 | 1948 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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