rs28292466 SNP Detail

Summary

• ID
  rs28292466
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:10197333 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAACTAGT TCATTGTGCT
  TCTTCTTGCT ACTGTCATTA ATTGATATAT ATAACAGACA CATGTTCTTT TCAGAATTAA
  GTACTTTTGT CGACACATTT TAAATTGAGA AGATGTTTTC TCTTAATGCC TGCTGTCCTG
  GAATAATGTT TACAATGTCT AAGTTAAGAC ACTAAATTTC TATATTTTCT TGAGCAGTCT
  S
  TATCTCTTCT TTGATATTTG CTATGTTCCT AGTGCCTATT GGCTGGCTCA TGTTCTACAT
  AGCAACAAAT TGTCCAGTAA ATGCATACTG TGAATAATAT ATAAGACAAG TTACCATAGC
  TACATGGAAT GATGCTTCGC TTCCTTCCTC CAAGATGCTA TGTCCATCCA TGACACATGC
  ATAAGTCAGA ACAATCCCAT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37853198	NES08640295	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs28292466					SNP	G	G	G	G	G	G	G	G	G	G	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37853198	NES08640295	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:10197333 () rs orientation: forward

Symbol	Name	Function Class
Rr588773	regulatory region 588773	4 bp proximal