AGTGATGGCA TGATTTCCGA CTGAAGTGAA TTTCTTAGAG CCAGAGTTTC CATACTTACC AAATGATGCT TCCTTGCTAG TCACCGTAAT GATCAAATAC GGTAAGAAGA TACAACTGCT TGACAACTGT AGTTCATAGA ACCCCCCTTC CTTTCTCTTA TGAGGGTGCA TGTGACCCTT CCTAATTGAG TGTTCATGCC Y TGTAGTTCAT GGAGACCACA CTGAAACATG TCCTTCTCAG TTTTGGCAAG GGAATGAGAT CACATATGCC AAATTGCCTA GCTTAATTAA TGTCTGGGAC AATATGGCCT CTAAATAAGG TAGAGTGACT GGAGGTGGCA GAGTGGCTGA TAATGAAAGT ATTGGTAATT TCTTTTAAGA GGTCCCCACA TTTCCTTGGG Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss38317326 | NES09529060 | PERLEGEN | MM_PANEL2 | f | SNP | C | C | C | C | C | C | C | C | C | C | C | T | C |
SNP Consensus Information | ||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs28230182 | SNP | C | C | C | C | C | C | C | C | C | C | C | T | C |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss38317326 | NES09529060 | PERLEGEN | MM_PANEL | f | SNP | C/T |
Location: Chr4:100142390 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Ror1 | receptor tyrosine kinase-like orphan receptor 1 | Intron | ||||||
Rr595970 | regulatory region 595970 | 1600 bp distal | ||||||
Rr595971 | regulatory region 595971 | 259 bp distal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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