CTCCTCTGTG CTGGCACACA CTAGGTGTTA CTGATAAGTA ACAATTTCTA TTGACAAATC CTGAGAATGA CTCAGCTACA AGTAAGTTTT TATATCACGT TTGATCAGAG AAGAGCAGTT TTAAATTATT GACTGGAAAA ACTTGTAAAG GACAAGTGAC TTACAGAAGA AGAGTGACTG TAGACAGGAG ATACACTGGG R CAGGCTGAGG CTGTGTGTGC AGATGAAGGG AGCTTGCTTC CGGGAGATGC TGAGGACAGT GCAGGCATGC CTTCAGGACG GGGACACCTG AGCCCATGCA CGGAGAAGGA CTGCTCAGGT GACGCTGGCC ATGCTGTTTA CAGTTAGTCT CAGTAATGTT TATGTGTGGG TCCTGTCCTA AGTGGGTTAC ATGTAGTAAT R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss38305229 | NES09510217 | PERLEGEN | MM_PANEL2 | f | SNP | A | A | A | A | A | A | G | A | A | A | A | A | A | A |
SNP Consensus Information | |||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs28213909 | SNP | A | A | A | A | A | A | G | A | A | A | A | A | A | A |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss38305229 | NES09510217 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr4:103204819 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Oma1 | OMA1 zinc metallopeptidase | Intron | ||||||
Noncoding-Transcript-Variant | ||||||||
Rr596392 | regulatory region 596392 | 1204 bp distal | ||||||
Rr596393 | regulatory region 596393 | 1293 bp distal | ||||||
Rr596394 | regulatory region 596394 | 444 bp distal | ||||||
Rr596395 | regulatory region 596395 | 1768 bp proximal | ||||||
Tssr38109 | transcription start site region 38109 | 1081 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
||
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support. |
last database update 03/18/2025 MGI 6.24 |
![]() |
|