rs28194225 SNP Detail

Summary

• ID
  rs28194225
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:102873365 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGGGCCAA GAAGCAGGAG
  TGGGTGGGTA GGGGAGCAGG GCAGGGGATG GGCATAGGGA ACTTTCAGGA TAGCATTTGA
  AATGTATATA AAGAAAATAT CTAATAAAAA TAAATAAATA AATAAATAAA TAGTCACATG
  TTTGCTTATT TCTGAGTGAA GAATTAGCAT CTGGTTCTAT TTTCTTTGTA ACCACATTTT
  W
  ATTTTTTTCC TGCTGTGCGA GGCATAGATG AGGGTCCAGA AGGACCCACT AGGATTTCCA
  TGTTCTTATG TCAAAGAGCA AGGAACTGGA CCAGGGACAC AGGATAATGG TAGAAATAGA
  TACAGCTTGG TGGTGGTGGT GGTGGTGGTA GTGGTGGTGG CAGCAATGGT AGAGTGAGGT
  GAGCAAGTGG CCAGACCACA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ
ss38306357	NES09522832	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	A	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ
rs28194225					SNP	T	T	T	T	A	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38306357	NES09522832	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:102873365 () rs orientation: forward

Symbol	Name	Function Class
Insl5	insulin-like 5	1704 bp downstream
Rr596350	regulatory region 596350	597 bp proximal