rs28194218 SNP Detail

Summary

• ID
  rs28194218
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:102874578 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTGGAGGA GCTGAAGGGT
  GATGATCCAT CTTTCAAACT TCATCCATGC TTAAGAGAAG CACAGTCCCT GTCTATGAGA
  TGGCACAGCA GTCTTTCCCA TCTTACCACC ATTAGAATGG GAGGCTTTGA ATCCCCTGTA
  GTAAAAACTG GCTAGATTGG GGCTGGACAG ATAGCGCAGT AGTTTGTTTC CCAGAACCCA
  Y
  CTGTAACTCC AGGGTCTCCA TTGCTCATAT GATCAAGAAG AATGTAAGAT TGCAAGGGGG
  ACCATTATTT TTAGTGATGC ATGACTTTTG CTTTAATTTT GTTTAAAATA TTTGTTATTC
  ATCTCTCCAG TCCCTGGTAT AAATTTGTTT GTTGGCACAT CCTCAATCAT TGACTCTAAC
  ATTTTTTTTA GACTTATGTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38306350	NES09522793	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	T	C	C	T	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs28194218					SNP	C	C	C	C	T	C	C	T	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38306350	NES09522793	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:102874578 () rs orientation: forward

Symbol	Name	Function Class
Insl5	insulin-like 5	491 bp downstream
Rr596350	regulatory region 596350	503 bp distal