rs28184332 SNP Detail

Summary

• ID
  rs28184332
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:106077382 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACTTCACCG ACCCATTGAA
  ATCTCTACAG AGCCAGACAG GCAACCTCTT CTAGTCATTT CGGTCGGCTG CCTGACTAGT
  ATGGTAAACT ATGGGGGCTC ACATCAGGGA GCACAAGGTG TGCCTGAGTC TGTGACATGG
  GGTCTATTCT TAAAGATGGA GCGAAGTATC AGGAAGCCAC CAAGGGATGG AGCAGCAGCA
  R
  CAGCAGCAAC TGAACCACTG CCTAGAACTT GACCACCACT AACAGCGCTG ACCAGCCCTG
  CTCTCTGGAC TGAGTGAGTG CTTCCCATAC AATGTCTCGA GAAACCAGAG GCACAGAACC
  CATAAGCACT ACACAGGATC AACCAGGGAG TCTTTAACAT CCAGTTTCAC CCAGATACTC
  ATTTTCAGGG GAAGAAACTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss38290370	NES09492481	PERLEGEN	MM_PANEL2	f	SNP	G	G	A	G	A		G	G	G		G
ss321245655	CHEV_4_105892790	CHEVERUD	SCREENING_POP	f	SNP						G				G
SNP Consensus Information
SNP					Consensus Type	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs28184332					SNP	G	G	A	G	A	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38290370	NES09492481	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:106077382 () rs orientation: forward

Symbol	Name	Function Class
Gm12729	predicted gene 12729	within coordinates
Rr596704	regulatory region 596704	488 bp proximal