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rs28174205 SNP Detail
Summary
  • ID
    rs28174205
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr4:104580032 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                CTATAAATGA GGAGATGGCA
    CCAGGCGTGG TTTCGAGTCT CACCTTGTAC TTAGATTACA AATGTCCTGG AGACCGTTGT
    CAGACGTAGT ACTATCAGAC ACAGGAAAGG TACTGTACTT TTTCCCTGGC CAGATTGAAG
    ACATGTAGCA TCTTACTACT TAATCAGCTG TGTGCCAAGC TATTGATCTT TGCAATGCTG
    Y
    CTCTTTGGAT TATTGAAAAA TCCCATCAGT TTTCAAAGCA CAAGTCTAAA ATTAAATTTG
    CATTAGCATA TTTTTATTTT CTGTCTTTGC TGAAAATATA CTTTAGATAG TCTTTGGATG
    GTGGTAATCT GAGCCTGTAC ATCTTCGACT AGTATTACTA TATTGCCAGA CATTGTGCCT
    CTATCTACTT GCATAAATTG                                            
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
DBA/2J
FVB/NJ
KK/HlJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
ss38298134 NES09504425 PERLEGEN MM_PANEL2 f SNP T T T T T T T T C T T C C
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
DBA/2J
FVB/NJ
KK/HlJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
rs28174205 SNP T T T T T T T T C T T C C
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss38298134 NES09504425 PERLEGEN MM_PANEL f SNP C/T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr4:104580032 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Dab1 disabled 1 Intron
Noncoding-Transcript-Variant
Rr596499 regulatory region 596499 937 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory