rs28174195 SNP Detail

Summary

• ID
  rs28174195
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:104581147 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGGTAATAG CTACCCCAGA
  GGCTTACTGC AAGCATCTAC TCCCCCACCA AAAAAGGGAG GGGTGTTGTT CCGCTCCTCG
  CTGCATCTCT AGAGACTGAA TCAGAGCCAA GCATCCAGCA TGGATATTTT TGGATGAATG
  AATGAGTCAA AGGAGGCAAT GTAGCTAGGA GGTACCAAAC ATGTTCTATA CAAATGCAGC
  R
  AGCCTTTGTT TCCAATGTGT TCCTTATAGG TTACTCCGGT TTGTTATTTT CTTTCCTCAG
  TCATGGGTAC TGGTGTCTCC TGAGCTGGCA TCTTGTTATA GACTGCAATA TTTCACACAC
  ACACACACAC ACACACACAC ACACACAGAC ACACACACAC ACGCATGCAT GCCCTTTATC
  TGCAAGGTGG GAATGTGGGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38298124	NES09504261	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	A	G	G	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs28174195					SNP	G	G	G	G	G	G	G	G	A	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38298124	NES09504261	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:104581147 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dab1	disabled 1			Intron
				Noncoding-Transcript-Variant
Rr596499	regulatory region 596499			within coordinates