rs28168532 SNP Detail

Summary

• ID
  rs28168532
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:101567481 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCAACATTT ACGTTGCAAG
  GATTAAAGAG TCCTGAACCC TTGGGAGAAT TCTACCAAGA GTGACACACA GTAGGCATTT
  GTGCTTAGTG GTATTTAAAA TCAAATGTGC TCTGGAAGAT CAAGAACAGG CAGTATAAAG
  CCAGAACACA GTCTCAAGAT CCCAGTGAAC TCAGAGTGAG CCTGGTGGGA GGAATCTGTA
  S
  ATGCTTTCAG TGAGTTTGAG GAGAAATGTG CTGAGAGCCT CTGCAGCAGA AAGGGCTACC
  ATCCCTTTTC ATTCAACTCA GCAAAGCTTA GAAGAAGAAA AAGAATTCCA GAGCAAGAAT
  AGCCATCCTG ATTGGCTTGG ACACCTCAGT ATGGTGCCTG TAACCCAGGG TGTGTTGGGC
  ACATTGTCTC TGAGCACTTT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38311553	NES09522249	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs28168532					SNP	G	G	G	G	G	G	G	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38311553	NES09522249	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:101567481 () rs orientation: forward

Symbol	Name	Function Class
Rr376927	regulatory region 376927	515 bp downstream
Rr596204	regulatory region 596204	152 bp proximal