rs28154256 SNP Detail

Summary

• ID
  rs28154256
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:106640886 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAGAAAGTCT CTGTCCCAGA TCTTAAATGA GTGAGCAAAG
  CCAGGAGTTT TGGGGCAAAT CATTACAGGG TTATTTCCTC TGAACTGAAC TTCTCAAAGA
  M
  GCCACATCTA TACGGAAGGT CCTGAATGTG GCTGGACTGT CGGCTGACTT GAACACTGTG
  ACTGTGGAGA GATGGAACAA ACCTGTATTT GTCTCTTAG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss38287979	NES09620392	PERLEGEN	MM_PANEL2	f	SNP	C	C	A	A		A	C	A		A	A		A
ss45712080	mCV23364544	ABI	CRAMUS_MOUSE	f	SNP		C			C	A
ss147171692	ENSMUSSNP4357334	ENSEMBL	ENSEMBL_Sanger	f	SNP		C				A
ss321247178	CHEV_4_106456294	CHEVERUD	SCREENING_POP	f	SNP									C			A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs28154256					SNP	C	C	A	A	C	A	C	A	C	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38287979	NES09620392	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:106640886 () rs orientation: forward

Symbol	Name	Function Class
Acot11	acyl-CoA thioesterase 11	Intron
Rr596808	regulatory region 596808	1654 bp proximal