rs28151636 SNP Detail

Summary

• ID
  rs28151636
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:105820615 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCAACATGA CAAGTGCAAT
  AAGGACAGAG GGCAGGGTTG CTAGGTAGCA GAAAGGACCA GTGTCATCCT CCCAGCTGGG
  AATGAGGAAA GGTTGGGTTC TTGAAGGAAA ACATGCGATG CCACCAGATG AAGGGCATGG
  ATGAGCAGGA GGCATAAAGG GAAACTGGGG CTTCTGCACA GTGGGAGTCC AAAGCTTTGA
  R
  ACAATGGGAT GTAGTTAGTT CAGTCAACAG AGACAAGGCT CGGGATGTGG GCAGGTGCCA
  GACAGAAGGA AATGCAGAGG CAGAATACTT GAGAAAGATG ACTCTACCTG TAAAAGGCAT
  CACCAGTTAA CATAGAAACT GTGCTAAAAG GGAGAAGTGT GGGAGGGAGT GCCTTGACCC
  TCGAGATGGG GACAGTATGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss38291768	NES09505856	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	A	G	G	G	G	G		A	A	G		G
ss321244765	CHEV_4_105636023	CHEVERUD	SCREENING_POP	f	SNP										A				A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs28151636					SNP	G	G	G	A	G	G	G	G	G	A	A	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38291768	NES09505856	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:105820615 () rs orientation: forward

Symbol	Name	Function Class
Rr376963	regulatory region 376963	within coordinates
Rr596654	regulatory region 596654	568 bp distal