rs28151151 SNP Detail

Summary

• ID
  rs28151151
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:109240201 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTGGATTCT TCTGATCCCC
  TTAAACTGAA TGATCCATTT CAGCCTTTCC CAGGCAATGA TAGTCCCAAA GAAAAAGATC
  CTGATATGTT TTGTGATCCA TTCACTTCTT CTACCACTAC CAATAAAGAG GCTGACCCAA
  GCAATTTTGC TAACTTCAGT GCTGTAAGTA CTGTGACTGG GCTGTTTGGG GAAAATCTTT
  Y
  CATTTATAGT TTGAAGAGTT TCAAGGATTT CTTCATAGTC TTCCAAATTT TCATCATTTT
  ATCAATATAC TAAAAATTAT CTTTTATCCT TCCCCCAAGC AAAACCTCTG TTTTGTTTTG
  TTTTGTTTTG CTGGTTCTTA GATGACTTCA TTACTTAGCT GATTTTAGTC ATTGTGGTTC
  TTGCAAACAA GATGTTTTAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss38277880	NES09521242	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T		C	T	T	C		T
ss321253924	CHEV_4_109055609	CHEVERUD	SCREENING_POP	f	SNP											C					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs28151151					SNP	T	T	T	T	T	T	C	T	T	T	C	C	T	T	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38277880	NES09521242	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:109240201 () rs orientation: forward

Symbol	Name	Function Class
Eps15	epidermal growth factor receptor pathway substrate 15	Intron
Rr597307	regulatory region 597307	215 bp distal