rs28151150 SNP Detail

Summary

• ID
  rs28151150
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:109240452 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATCATTTT ATCAATATAC
  TAAAAATTAT CTTTTATCCT TCCCCCAAGC AAAACCTCTG TTTTGTTTTG TTTTGTTTTG
  CTGGTTCTTA GATGACTTCA TTACTTAGCT GATTTTAGTC ATTGTGGTTC TTGCAAACAA
  GATGTTTTAT ATAGCCTTTC TCTCAGTCTT GATGAATCAA ATATAAGTAA AATCTTGACT
  R
  CTACTATTTG GCAAATGTAT GATGGTGATT TAAAAGCTTG CTGTCTGCCT ACTCTGTATA
  ATGCCAGTAA GAAGCTTGTA TATTTGTAGC TGTGGATGTA TGTTTGTGTA CAAAGATTTG
  GTAGTTTCTA GAGACCAGTT GACACTTGGC GTGAGGGGAC AGTGCAGGGG TTCTTTGAAT
  ACAAAACAGG TCTTTACTCG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss38277879	NES09521244	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G		G	G	G	A		G
ss321253925	CHEV_4_109055860	CHEVERUD	SCREENING_POP	f	SNP											A					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs28151150					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38277879	NES09521244	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:109240452 () rs orientation: forward

Symbol	Name	Function Class
Eps15	epidermal growth factor receptor pathway substrate 15	Intron
Rr597307	regulatory region 597307	466 bp distal