rs28151141 SNP Detail

Summary

• ID
  rs28151141
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:109241816 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTATCTAG TATCTACTGA
  AGTTGAAATT TGGTTGTAGT TACAAATATT TTTTCCAATC TAATTAATCA TCAGTATTCA
  GGTTTTACTT AAGCTGGGTC ATTTTAGTTA TATAAAACTG GGTTAAAAGT TCCTAAGGAC
  TATCAGAAAC TATGTTTGTT AAAAAAATAA TAATAATTAG GTTCACATTC TGTATCTAAC
  R
  TTCTTCTATG TAGCAAAATT TGTCTGTTTT TGCTTTATAC TTTTGGGGTT TCCTGAGAGG
  CCAGGTAAAG CGGCTATCAC CAGTGGCATT AATTTTAATG ATATGTCAAT CAGGCATGCT
  GCCATATGGT TGTAATCCCA CAACCTAGGA CACAGGCAGC AGGATCATGA GTTTGAGGCC
  AACATAAGCC ACCTAGTGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38277870	NES09521262	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs28151141					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38277870	NES09521262	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:109241816 () rs orientation: forward

Symbol	Name	Function Class
Eps15	epidermal growth factor receptor pathway substrate 15	Intron
Rr597307	regulatory region 597307	1830 bp distal
Tssr38341	transcription start site region 38341	1279 bp upstream
Tssr38342	transcription start site region 38342	1379 bp upstream