GCCTGAGGCA TTGGGAAGGT GCCCGTCCCA GACCACTGGG CTTCTGAGAA GATCCGTCTA TGGAGCACAT AGTAAGTGGC TGCAGCACCT GCTTGGCCCT TTGCCTAGGG CTCCTCATGT GCAGCTTTCT ATCAGCCTTT GTATGGAGTC TGAAAGCAGC TTTGATCAAC AGTCTCTAGG GTGGCACCAT ACTCCCTCAT Y TGGTTCCAAG GGAAGCCAGA GTTCAAGGCA GTCTGCTGCC TCCTTCTGGC TTTTTCAAGA AGGTACTTTG TGTCCCTGGA GAATCATTCA GGAGTGGCCA TAGACTGACT CTTACATACC AAAAACAACT TTTGATAGAA AAGAAATGGC ATTCCATTAC CCAGTATGCC ATTGTGTAAC TGAGAGTGAA AACGGCTGTA Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss38308689 | NES09537989 | PERLEGEN | MM_PANEL2 | f | SNP | C | C | T | C | C | C | T | C | T | C | C | C | C | C | ||
ss321233791 | CHEV_4_102157569 | CHEVERUD | SCREENING_POP | f | SNP | T | C | ||||||||||||||
SNP Consensus Information | |||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
||||
rs28143465 | SNP | C | C | T | C | C | C | T | C | T | T | C | C | C | C | C | C |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss38308689 | NES09537989 | PERLEGEN | MM_PANEL | f | SNP | C/T |
Location: Chr4:102342161 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Pde4b | phosphodiesterase 4B, cAMP specific | Intron | ||||||
Noncoding-Transcript-Variant | ||||||||
Rr596250 | regulatory region 596250 | 1267 bp distal | ||||||
Rr596251 | regulatory region 596251 | within coordinates | ||||||
Rr596252 | regulatory region 596252 | 33 bp proximal | ||||||
Rr596253 | regulatory region 596253 | 218 bp proximal | ||||||
Rr596254 | regulatory region 596254 | 1208 bp proximal | ||||||
Rr596255 | regulatory region 596255 | 1303 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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