rs28141797 SNP Detail

Summary

• ID
  rs28141797
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:91368675 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGTTTCTCT TTCTTGAGCA
  AGTATATTTT GTCATGGAAA CAGATACTGG AAACTAGGAG AAAGGTATGT AGCACCCATA
  TATTGTAGTT TTTCATGAGA TACTTTTTGC ACACTCTTTT CATCTTGCTA TAGTTATCAA
  TAGTGCCTTC TCTCATGATC AGAGTTCTGC CCATCCTGAT CTTAATCCTT AGAGCATTGA
  R
  CAATGTATAT GACTGCACCA TTATGATAGG GCAGGTGGAG AAGAATCAAG CAAGATAGAA
  TGAATATTCC TTTTTCTTAC ATTCTTCCAG CTAAGTCAGA AGATTGTATT AGAATTGTAT
  AAAATTAGAG CTGCAATATT TTATCTCATT AATTTTTGTG TCACTTGAAC AATGTGTATT
  CTCTTTAGTC TTGGTCTAAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss38268822	NES09573855	PERLEGEN	MM_PANEL2	f	SNP	A	A	G	A	G	A	A	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs28141797					SNP	A	A	G	A	G	A	A	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38268822	NES09573855	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:91368675 () rs orientation: forward

Symbol	Name	Function Class
Rr595271	regulatory region 595271	1538 bp proximal