rs28138160 SNP Detail

Summary

• ID
  rs28138160
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:104159330 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTAACAATA GTGGCATTGT
  CTGACACTGG GGTAAGCAGA ACCGCACACA CCGTTTTTTT TTTTTTTTTT TTTTTGTGGG
  AACTAGAACT AGGGAAACTT TAATAAGACA GGAAGGACCT TGCATGGGAA AGGCTACTTA
  AAACTAAGAT TCATATGTAA GCCACAGACT CACCACCACT AGGGAAAGCA ATATTTTCAC
  W
  ATCATGTTTC CTAAACCCTA ATCTGCATAG TTTTTCCACA TTTTAATATC TGGAAAATGA
  GAATATATTC CAAAATTGCT GATCTCAGAA TAATGAGATT CAGTAGCACT GCCCAGCTGG
  CCAGAGCCTT TCACACCGCC ATCTCTTGAC CAAGTTATGC CCACAGCCAC TACAGCATGC
  ACTCACTTTG ACTGACAGCT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
ss38300479	NES09497903	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	T	A	A	A	T	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
rs28138160					SNP	A	A	A	A	T	A	A	A	T	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38300479	NES09497903	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:104159330 () rs orientation: forward

Symbol	Name	Function Class
Dab1	disabled 1	Intron
Rr596447	regulatory region 596447	938 bp proximal