rs28132256 SNP Detail

Summary

• ID
  rs28132256
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107602551 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGTCTCCC TGAGAGACTG
  CAGTGGAGGC TTCCCCAGCC CCGCAGGCAC ATCTTAAGGA GAGCAGAGCT GCTGTCTTTG
  TTTGGCATTG TTCAATGTCA GCAGTAGAGA AGCAAAATCA GCCCGGAGGG CTGTTTAATT
  GCAATTGGGG GGAAAAATCA TGCTTTTTCA AGGGAGAAAA GGAGAGTTCT CCATCCCTTC
  R
  GTTTCCAGTG AGACACTGTA TCTGCTGATT CGGTCTCATT CAGATCTAAG CAAGCACATT
  CATCATTCCG AGAAGTGCCA CTTAAGCGAC TGCCTTGCCT CAAGTGTTCC CAAGCACAAT
  TAGGCATGGT GCAAGCTACT GACCCCCAGA GAGCAAGCAC CAAGGGGAGA TGCACCCCTT
  ATGGCCCTGG AAAATGCTGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38283576	NES09507616	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs28132256					SNP	G	G	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38283576	NES09507616	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107602551 () rs orientation: forward

Symbol	Name	Function Class
1700047F07Rik	RIKEN cDNA 1700047F07 gene	1070 bp downstream
Rr597058	regulatory region 597058	within coordinates